@ EMBL-EBI

Projects

We value collaborating closely with scientists and other stakeholders across government, industry, and academia. This allows us to bridge the gap between academic research and practical, real-world applications.

Ongoing

Pesticides in human cells
Pesticides in human cells

We are measuring Cell Painting and metabolomics in human cells after exposing them to a panel of pesticides. The objective is to detect common modes-of-action to provide a rational basis for evaluating the risk of exposure to pesticide mixtures.

OASIS Consortium
OASIS Consortium

Our goal is to assess the combination of Cell Painting, transcriptomics and proteomics in a variety of cell models for safety assessment of drugs, pesticides, and environmental contaminants, using hepatotoxicity as test case. We are a precompetitive collaboration between 31 academic, non-profit, industry, and government institutions.

Image-based carcinogen detection
Image-based carcinogen detection

In this project, we are applying deep learning methods to images of H&E-stained tissue slides collected after exposing rodents to carcinogens to investigate mutagenic and non-mutagenic modes-of-action at a spatially-resolved, single-cell level. This project is in collaboration with the United States NIEHS and the Coorens Lab at EMBL-EBI.

Previous

Before starting her lab, Jess worked on several large projects that continue to inspire (and connect!) the Ewald Lab. Browse to explore the kind of collaborative work we strive to emulate.

EcoToxChip Project
EcoToxChip Project

The EcoToxChip is a toxicogenomics New Approach Method (NAM) purposefully designed for use in chemical prioritization and environmental management ​activities.

JUMP Consortium
JUMP Consortium

JUMP (Joint Undertaking for Morphological Profiling) Cell Painting is an effort to produce data and resources to make use of Cell Painting data. The Ewald Lab uses JUMP data for benchmarking and transfer learning.

HumanIslets Consortium
HumanIslets Consortium

HumanIslets.com brings together five omics types and 74 in vivo and in vitro metadata for ~550 donors. This is the type of integrative, user-friendly tool that the Ewald Lab hopes to build!